Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816265.1_cds_XP_016498721.1_12715
CDS Infomation

[gene=LOC107817410] [db_xref=GeneID:107817410] [protein=LOW QUALITY PROTEIN: gamma-tubulin complex component 3-like] [exception=unclassified translation discrepancy] [protein_id=XP_016498721.1] [location=complement(join(81989..82298,82394..84050,84053..84806))] [gbkey=CDS]
Sequence

ATGGACGACGGCGACAAAAGAGCCCTAGATCTAGTCAAAGAACTAGTCCACCGCTTACTC
TCCACTTCTCCACCTCCCCCCACCCCCAACTCCTTAAACCCTAACCCTAACCTCCCTTCA
GATCAACAGTTCCATCAAGCTTTAAGATACGCTATTCGCATACTCTCCAGTCGAATGACA
CCTTCAATTGCTGCCGACGATTCCGCAATGGCTGAATCCATTAAGCGACGGTTAGCTACT
CAAGGTAAATCCTCTGATGCCCTCACTTTTGCCGATGTTTATTCCAAATTCTCGTCGAAA
ACGGGACCTGGAAGTGTGAAAAACAAATGGGCTGTTTTATATTTGCTTAAAACTGTCTCT
GAAGATCGTAAAATTCAAAAACATCAGTCCAATAGTGTAGCTTCTAGCGGGTTTTTAAGC
TCCGCATTGTCAGGTGGGTTACCTGAATTGGTTGGAAGTGAATCGAATCATAATTTGAAT
AATTTGAAGGGTGAATTGGGGAAAATGGAGAAGAGTTATGGTGATGGTAGTTTGAGTAAT
AAATTTAAGAATTTGAATTGTTTAGGGGATAATTCGAGGAGTTTGAGGGGTAGAGGTGAT
GTAGGGAAGGGATGGAGTGGAGGGGTTTTGATGGTTTATAAGGATCCGGAGAACTTGCGA
GACATGGCGTATAAGGAATTTGTGGATTTGTCGAAGGAAGAGAATGAGGTGTCCGAGGAG
GTTTTGGTGAGGGATGTGTTGTATGCTTGTCAAGATGATGGAAAGTATGTGAGGTATGAT
AAGAATGCTGATGGCTATGTGTTGCCTGATTGGATGAAGGTTCCAAGGGCTACTAGGAGT
GTAGTTAGGAAGCTTTGTGAGCTTGGCTGGTTGTTTAGGAAAGTTAAAGGGTATATCTCC
GAGAGTATGGATCAGTTCCCTGCTCAAGATGTAGGCACCGTTGGACAAGCGTTTTGTGCT
GCATTGCAGGATGAGCTTTCGGAGTACTATAAATTGTTGGCAGTGCTCGAAGGGCAGGCG
ATGAATCCGATACCGTTGGGTTCGGGGGGTGGATGTTCAGGGAATTATATGTCTCTAAGA
AGACTGTCGGTTTGGTTCGCTGAGCCGATTGTGAAGATGAGATTGATGGCTGTTTTAGTT
GATAACTGTAAGAGCTTGAAGGGTGGGGCAATGGCTGGAGCAATTCACATGCATGCTCAG
CATGGTGATCCACTCGTCAATGATTTCATGAAAAGGCTACTGCGTCGGGTGTGTTCGCCT
CTTTTTGAGATGGTGAGGAGATGGGTACTTGAAGGAGAGCTTGAAGATATATTTGCTGAG
TTTTTCATTGTGAGTCAAACTGTCAAAGACGAGTCCCTTTGGAGAGAAGGTTACCGCCTT
CATGCTCACATGCTTCCTGCTTTTATTTCTCAATCTCTTGCTAAACAGATTTTAAGGACT
GGCAAGTCAATCAACTTTCTCAGAGTTTGTTGTGATGATCGAGGTTGGGCTGATGCTGCA
ACAGAAGCAGCAACAGCTGTTGGAACTACAACCACGAGAGGAAGTCTTGGATATGGTGAA
ACTGATGCACTTGAATCTTTGGTTACAGAAGCTGCAAAAAGAATCGATAAGCATTTACTT
GAACTCATGCACAAAAGATACATGTTCAAGGAACATTGTCTTGCCATTAAGCGCTATTTG
CTTCTCGGTCAAGGTGATTTTGTACAATATCTAATGGATATTGTTGGTCCTGAGCTTTCT
GAGCCGGCTAATACTATCAGCTCATTTAAGCTGGCAACCTTGTTGGAGAGTGCTGTCACA
TCGTCTAACGCGCAGTATGATGGCTGTGATATACGGTCTAGATTAAGGGTTAAGATGATG
CCACATAACACTGGAGATAGAGGGTGGGATGTATTTTCTTTGGAATACGATGCAGGTGTT
CCTTTAAATACAATTTTTACAGAGTCTGTAATGACAAGATATATAAGAGTCTTCAATTTC
TTGTGGAAACTCAGAAGAGTAGAACATGCACTAACTGGTGCTTGGAAAACCATGAAACCA
AATTGTATCACTTCCCATTTCTTCTCCAAGTTGCCCCAAGCTGTTAAGTTCCAGTTGATT
TTGACATCAAGAAAGTGTCAAGTTCTTTGGGATGAGATGAATCATTTTGTTTCTAATTTG
CAGTACTACATCATGTTTGAAGTTTTGGAGGTCTCATGGTCTAATTTTGTGAAAGAAATG
GAATTAGCTAAAGACCTTGATGATCTTCTTGCTGCGCATGAAAAGTATTTATTTTCAATT
TTAGAGAAGTCTTTGCTTGGAGAACGTTCTCAGGATCTTAACAAGACACTCTTTGTTTTA
TTTGACCTAATATTGCGCTTCCGTAGTCATGCAGATCGACTCTATGAAGGCATTAATGAG
CTGCAATCAAGGACTGCAGAATCATCAACTAATTCTCGTGATAAAGTCAAATCACGGGGA
AAATCAAATGATAAATCGTCAGAACCAGGGTCATGGCTTGGTGAAGGCCGAAAGGCCTTC
ACTCAACGTGCTGGAGAATTCCTCAGAAATATGGGAAATGATATAGATGCGATCGGAAAG
GATTATGCAACCATCTTTGAGGGGTTCATTTCACAGTTGCCTGTGCAGCAGCACATTGAT
TTGAAGTTTCTCATGTTTAGGCTCAACTTCACTGAGTTCTATAGTCAGCTACGCCCAATT
ACAAGAGGAAATCTTTTTTAG

Peptide Sequence

PEP ID

XP_016498721.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component 3-like [Nicotiana tabacum]
Sequence

MDDGDKRALDLVKELVHRLLSTSPPPPTPNSLNPNPNLPSDQQFHQALRYAIRILSSRMT
PSIAADDSAMAESIKRRLATQGKSSDALTFADVYSKFSSKTGPGSVKNKWAVLYLLKTVS
EDRKIQKHQSNSVASSGFLSSALSGGLPELVGSESNHNLNNLKGELGKMEKSYGDGSLSN
KFKNLNCLGDNSRSLRGRGDVGKGWSGGVLMVYKDPENLRDMAYKEFVDLSKEENEVSEE
VLVRDVLYACQGXDGKYVRYDKNADGYVLPDWMKVPRATRSVVRKLCELGWLFRKVKGYI
SESMDQFPAQDVGTVGQAFCAALQDELSEYYKLLAVLEGQAMNPIPLGSGGGCSGNYMSL
RRLSVWFAEPIVKMRLMAVLVDNCKSLKGGAMAGAIHMHAQHGDPLVNDFMKRLLRRVCS
PLFEMVRRWVLEGELEDIFAEFFIVSQTVKDESLWREGYRLHAHMLPAFISQSLAKQILR
TGKSINFLRVCCDDRGWADAATEAATAVGTTTTRGSLGYGETDALESLVTEAAKRIDKHL
LELMHKRYMFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLATLLESAV
TSSNAQYDGCDIRSRLRVKMMPHNTGDRGWDVFSLEYDAGVPLNTIFTESVMTRYIRVFN
FLWKLRRVEHALTGAWKTMKPNCITSHFFSKLPQAVKFQLILTSRKCQVLWDEMNHFVSN
LQYYIMFEVLEVSWSNFVKEMELAKDLDDLLAAHEKYLFSILEKSLLGERSQDLNKTLFV
LFDLILRFRSHADRLYEGINELQSRTAESSTNSRDKVKSRGKSNDKSSEPGSWLGEGRKA
FTQRAGEFLRNMGNDIDAIGKDYATIFEGFISQLPVQQHIDLKFLMFRLNFTEFYSQLRP
ITRGNLF

Transcript Sequence

Gene sequence data has not been registered.